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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20092535_20105050_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20092535 - 20105050

Intron Length:

12516

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATGGTCC

5'SS Class:

strong_major

3'SS Sequence:

GCTTTTTCCCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTAAT

U12 Branch Point Sequence:

GTTTTTGTAATT

Flanking Amino Acid:

LYINSYKPFQILVKGTVGDG

Intron Amino Acid Position:

929

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

69.2

36.3

Major BPS

84.4

0.85

1.1

34.5

Major PPT

80.5

0.69

0.8

72.9

37.4

Minor 5ss

44.1

-0.6

59.5

45.4

Minor BPS

59.2

0.37

79.54

37.3

Associated Gene:

Gene:

MALRD1

Ensembl Gene ID:

ENSAPLG00000023464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032674

19913135 - 20166774

253640