Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_2010268_2015586_R

Intron Information:

Intron Rank:

140491

Intron Class:

major

Intron Phase:

Intron Coordinates:

2010268 - 2015586

Intron Length:

5319

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTT|GTAAGTACC

5'SS Class:

major

3'SS Sequence:

TTCTCCTACATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTTAAA

U12 Branch Point Sequence:

TTCTCCTACATA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

73.6

35.1

Major BPS

75.2

0.63

1.1

75.9

36.3

Major PPT

0.52

0.8

69.1

30.4

Minor 5ss

39.6

-1.2

2.7

53.3

37.4

Minor BPS

54.1

0.12

2.1

70.44

42.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032255

2007822 - 2015648

7827