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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20137174_20137231_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20137174 - 20137231

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AGA|GCAGGGGGG

5'SS Class:

weak_major

3'SS Sequence:

ACCACACCATCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

ATAACAT

U12 Branch Point Sequence:

GTCTGAATAACA

Flanking Amino Acid:

LKLTLKGTIQKPPSFGSLEE

Intron Amino Acid Position:

357

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

59.1

0.22

1.3

54.5

Major BPS

62.2

0.3

1.1

69.4

35.8

Major PPT

0.16

52.7

36.2

Minor 5ss

18.2

-3.7

4.2

23.8

38.8

Minor BPS

46.2

-0.2

2.2

62.36

43.3

Associated Gene:

Gene:

MALRD1

Ensembl Gene ID:

ENSAPLG00000023464

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032674

19913135 - 20166774

253640