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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20278208_20279870_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20278208 - 20279870

Intron Length:

1663

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTTTGTGCA

5'SS Class:

major

3'SS Sequence:

TTAATTTTAACAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTTAAT

U12 Branch Point Sequence:

TTTTTTTTAATT

Flanking Amino Acid:

KKMLLEEIQKQFKGICVPVL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.1

0.59

1.2

68.9

35.7

Major BPS

99.5

1.23

0.5

98.2

4.2

Major PPT

77.4

0.62

73.6

40.4

Minor 5ss

35.4

-1.7

2.9

42.3

44.4

Minor BPS

84.9

1.17

0.8

94.97

24.6

Associated Gene:

Gene:

NSUN6

Ensembl Gene ID:

ENSAPLG00000013473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025613

20277230 - 20295970

18741

ENSAPLT00000024567

20277230 - 20293044

15815

ENSAPLT00000014045

20277230 - 20296133

18904