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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20279951_20280744_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20279951 - 20280744

Intron Length:

794

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTTGAAAT

5'SS Class:

major

3'SS Sequence:

ATCTTGTTTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTTGAC

U12 Branch Point Sequence:

TTTGACTTAACT

Flanking Amino Acid:

DILLIPAIGPRQDLKKHESE

Intron Amino Acid Position:

104

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.4

0.55

1.1

74.5

35.1

Major BPS

86.5

0.91

0.8

77.4

37.4

Major PPT

83.5

0.75

0.8

80.7

36.3

Minor 5ss

37.6

-1.4

2.8

49.3

46.6

Minor BPS

77.5

0.94

1.5

93.1

35.2

Associated Gene:

Gene:

NSUN6

Ensembl Gene ID:

ENSAPLG00000013473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025613

20277230 - 20295970

18741

ENSAPLT00000024567

20277230 - 20293044

15815

ENSAPLT00000014045

20277230 - 20296133

18904