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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2028458_2029027_R

Intron Information:

Intron Rank:

140486

Intron Class:

major

Intron Phase:

Intron Coordinates:

2028458 - 2029027

Intron Length:

570

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGACTC

5'SS Class:

strong_major

3'SS Sequence:

GTCTACTTCACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTCTAT

U12 Branch Point Sequence:

ACTTTTCTAAGT

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.9

0.73

69.9

41.1

Major BPS

73.8

0.59

1.3

72.8

Major PPT

74.9

0.56

0.9

68.1

37.2

Minor 5ss

35.1

-1.7

3.5

50.3

46.3

Minor BPS

49.7

0.05

1.9

69.91

41.6

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022964

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019923

2007806 - 2029105

21300

ENSAPLT00000021073

2009981 - 2029105

19125