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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20289081_20290787_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20289081 - 20290787

Intron Length:

1707

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGTAA

5'SS Class:

strong_major

3'SS Sequence:

GCTGTTTTCACAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

GCTGTTTTCACA

Flanking Amino Acid:

LSVEKREDEQEGPPFLPESF

Intron Amino Acid Position:

308

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.3

31.9

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

77.6

0.62

0.9

71.5

38.4

Minor 5ss

35.4

-1.7

3.3

46.2

49.1

Minor BPS

48.6

-0.1

1.8

58.49

Associated Gene:

Gene:

NSUN6

Ensembl Gene ID:

ENSAPLG00000013473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000025613

20277230 - 20295970

18741

ENSAPLT00000014045

20277230 - 20296133

18904