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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20290937_20292861_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20290937 - 20292861

Intron Length:

1925

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTACGTATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTCTCTGCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTAAAT

U12 Branch Point Sequence:

TTACATTTAAAT

Flanking Amino Acid:

QPLQRKLFTVAVKLLKPGGV

Intron Amino Acid Position:

358

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

78.1

36.4

Major BPS

82.3

0.8

0.9

87.6

25.7

Major PPT

93.2

0.97

0.6

89.1

19.8

Minor 5ss

39.4

-1.2

50.9

40.1

Minor BPS

0.39

1.6

77.07

38.6

Associated Gene:

Gene:

NSUN6

Ensembl Gene ID:

ENSAPLG00000013473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000024567

20277230 - 20293044

15815

ENSAPLT00000014045

20277230 - 20296133

18904