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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20292988_20295920_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20292988 - 20295920

Intron Length:

2933

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACTACTA

5'SS Class:

major

3'SS Sequence:

GTCACTTGCAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

TTCTGTGTCACT

Flanking Amino Acid:

TFPCLQLQRQEPHIGGEGMR

Intron Amino Acid Position:

400

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

71.3

0.5

1.1

64.7

41.2

Major BPS

71.2

0.53

37.5

Major PPT

54.5

0.1

1.1

54.6

39.3

Minor 5ss

34.5

-1.8

3.4

48.4

47.1

Minor BPS

-0.3

2.6

70.57

Associated Gene:

Gene:

NSUN6

Ensembl Gene ID:

ENSAPLG00000013473

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014045

20277230 - 20296133

18904