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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20304319_20308991_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20304319 - 20308991

Intron Length:

4673

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTACAGTTT

5'SS Class:

major

3'SS Sequence:

GTTGTGACAGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

CGTATGTGAACT

Flanking Amino Acid:

ISPGSNINLQGSQGDQRNDH

Intron Amino Acid Position:

410

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.7

0.56

1.1

38.7

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

62.8

0.29

1.1

56.5

43.3

Minor 5ss

40.9

-1

3.7

64.2

47.3

Minor BPS

46.5

-0.1

2.2

65.87

44.5

Associated Gene:

Gene:

CACNB2

Ensembl Gene ID:

ENSAPLG00000013189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039343

20303833 - 20474070

170238

ENSAPLT00000032202

20303833 - 20543363

239531

ENSAPLT00000026440

20303833 - 20543363

239531

ENSAPLT00000013757

20303833 - 20381762

77930

ENSAPLT00000040164

20303833 - 20380832

77000