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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20310634_20340065_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20310634 - 20340065

Intron Length:

29432

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

TTATTTTCCACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGTTAAT

U12 Branch Point Sequence:

CTTTTGTTAATG

Flanking Amino Acid:

EAKDFLHVKEVLQRLIKSRG

Intron Amino Acid Position:

145

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

23.6

Major BPS

84.4

0.85

34.5

Major PPT

84.5

0.78

0.8

80.4

31.5

Minor 5ss

36.8

-1.5

2.7

42.6

38.4

Minor BPS

57.1

0.08

2.1

66.07

42.7

Associated Gene:

Gene:

CACNB2

Ensembl Gene ID:

ENSAPLG00000013189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039343

20303833 - 20474070

170238

ENSAPLT00000032202

20303833 - 20543363

239531