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Intron Name: Anas_platyrhynchos_platyrhynchos_2_2036465_2054228_F

Intron Information:

Intron Rank:

134711

Intron Class:

major

Intron Phase:

Intron Coordinates:

2036465 - 2054228

Intron Length:

17764

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTTAGATAT

5'SS Class:

strong_major

3'SS Sequence:

TTCTTATCAGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

TTTTTCTTATCA

Flanking Amino Acid:

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

1.1

78.9

30.7

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

78.2

0.63

0.9

74.9

33.6

Minor 5ss

-1.6

47.9

47.7

Minor BPS

77.2

0.85

1.5

86.84

31.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000022442

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019760

2018300 - 2054554

36255