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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20532216_20543267_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20532216 - 20543267

Intron Length:

11052

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGGCCG

5'SS Class:

major

3'SS Sequence:

TTTCTTTTAACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

AACTCAT

U12 Branch Point Sequence:

TTTCTTTTAACA

Flanking Amino Acid:

DNPPPAAAAQSYSKGARRKN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.7

0.63

1.1

57.9

46.7

Major BPS

78.3

0.7

0.8

77.7

26.1

Major PPT

87.2

0.84

0.8

84.6

28.7

Minor 5ss

29.7

-2.3

3.4

38.8

46.5

Minor BPS

78.7

0.9

84.25

28.8

Associated Gene:

Gene:

CACNB2

Ensembl Gene ID:

ENSAPLG00000013189

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000032202

20303833 - 20543363

239531

ENSAPLT00000026440

20303833 - 20543363

239531