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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20597138_20599279_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20597138 - 20599279

Intron Length:

2142

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTAT

5'SS Class:

strong_major

3'SS Sequence:

TATAAATAACCAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTTTTAT

U12 Branch Point Sequence:

TTTTATTTATTT

Flanking Amino Acid:

LNSTTELQVTDLEQLLNVLT

Intron Amino Acid Position:

254

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.3

0.97

0.8

30.2

Major BPS

96.5

1.15

0.6

34.2

Major PPT

58.3

0.19

1.1

49.5

46.8

Minor 5ss

45.5

-0.5

2.9

64.1

47.4

Minor BPS

64.4

0.53

1.7

84.57

36.4

Associated Gene:

Gene:

SLC39A12

Ensembl Gene ID:

ENSAPLG00000013036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040309

20574620 - 20607357

32738

ENSAPLT00000013583

20574620 - 20609849

35230