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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20599488_20602792_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20599488 - 20602792

Intron Length:

3305

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAGAAA

5'SS Class:

strong_major

3'SS Sequence:

GTCCTGATTTCAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCTTTAT

U12 Branch Point Sequence:

TTGTCCTGATTT

Flanking Amino Acid:

KLHFKTPETQCVDVSTLEKN

Intron Amino Acid Position:

185

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

82.1

0.76

0.9

77.3

32.6

Major BPS

83.9

0.84

73.9

41.3

Major PPT

73.8

0.54

69.6

40.4

Minor 5ss

30.9

-2.2

3.2

46.4

Minor BPS

0.49

1.7

80.77

41.3

Associated Gene:

Gene:

SLC39A12

Ensembl Gene ID:

ENSAPLG00000013036

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000040309

20574620 - 20607357

32738

ENSAPLT00000013583

20574620 - 20609849

35230