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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20642388_20643075_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20642388 - 20643075

Intron Length:

688

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GTG|GTGAGTTCT

5'SS Class:

strong_major

3'SS Sequence:

TTTATTCCTCCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CCTTTAT

U12 Branch Point Sequence:

TTTTCCTTTATT

Flanking Amino Acid:

YSGYICQKNSDPKLFKSSST

Intron Amino Acid Position:

1087

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.1

0.83

0.8

79.3

29.7

Major BPS

71.5

0.54

1.1

63.3

42.8

Major PPT

86.1

0.81

0.8

78.1

36.3

Minor 5ss

37.5

-1.4

2.9

47.5

42.3

Minor BPS

81.6

1.08

1.4

96.2

29.4

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012345

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012928

20634897 - 20668220

33324