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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20646138_20647355_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20646138 - 20647355

Intron Length:

1218

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATCATAA

5'SS Class:

major

3'SS Sequence:

TTGTTTTTCCTAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTGAT

U12 Branch Point Sequence:

GATGGCCTAACT

Flanking Amino Acid:

PEDWLLFKNQCYKFFGSSYQ

Intron Amino Acid Position:

952

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

70.5

0.48

1.2

66.6

35.3

Major BPS

71.2

0.53

37.5

Major PPT

82.5

0.73

0.8

77.1

37.1

Minor 5ss

48.9

-0.1

2.6

64.6

46.8

Minor BPS

48.7

-0

2.2

70.79

45.5

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012345

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012928

20634897 - 20668220

33324