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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20671061_20671683_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20671061 - 20671683

Intron Length:

623

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAGGCTAT

5'SS Class:

strong_major

3'SS Sequence:

GATGCCAAAAAAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTCTAAT

U12 Branch Point Sequence:

TATTCATTTACA

Flanking Amino Acid:

TILKVTANMKDKEHGQSTVW

Intron Amino Acid Position:

1160

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

81.4

0.74

74.9

38.1

Major BPS

94.5

1.11

0.6

92.2

14.6

Major PPT

46.5

-0.2

1.1

39.8

Minor 5ss

44.1

-0.6

3.2

63.6

48.1

Minor BPS

64.3

0.44

1.9

78.01

37.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012841

20670831 - 20704434

33604