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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20675218_20676395_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20675218 - 20676395

Intron Length:

1178

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

AAT|GCATTCAGT

5'SS Class:

weak_major

3'SS Sequence:

TTATGTGCGATAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTCTTAT

U12 Branch Point Sequence:

GTTTTCTTATGT

Flanking Amino Acid:

EMSWAQSVTQCGTLASVEDL

Intron Amino Acid Position:

1139

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

54.4

0.11

1.4

58.3

46.1

Major BPS

91.4

1.03

0.7

79.9

34.9

Major PPT

61.8

0.27

1.1

Minor 5ss

39.4

-1.2

61.3

43.6

Minor BPS

60.6

0.41

1.9

80.05

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048329

20670831 - 20706391

35561