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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20676531_20679758_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20676531 - 20679758

Intron Length:

3228

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGG|GTAAGATGA

5'SS Class:

strong_major

3'SS Sequence:

ACATTTCTTTTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

GCATCCATAATA

Flanking Amino Acid:

KHFPVCKMSEGILPSDPPQD

Intron Amino Acid Position:

1006

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.73

68.7

39.1

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

76.4

0.6

0.8

74.2

35.7

Minor 5ss

36.9

-1.5

39.1

46.1

Minor BPS

60.6

0.33

1.6

66.12

40.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039291

20670831 - 20707144

36314

ENSAPLT00000012841

20670831 - 20704434

33604

ENSAPLT00000048329

20670831 - 20706391

35561