Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_20691936_20692534_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20691936 - 20692534

Intron Length:

599

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CCT|GTAAGTACT

5'SS Class:

major

3'SS Sequence:

ATTTCCCACACAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTGAAA

U12 Branch Point Sequence:

ATTTCCCACACA

Flanking Amino Acid:

EGFAWIDGSPVIYENWDQDE

Intron Amino Acid Position:

523

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

76.8

0.63

1.1

77.8

36.6

Major BPS

65.4

0.38

1.4

75.9

36.3

Major PPT

72.5

0.51

0.9

66.4

34.1

Minor 5ss

41.3

-1

2.8

62.9

Minor BPS

48.2

-0.1

2.4

70.39

41.8

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048329

20670831 - 20706391

35561

ENSAPLT00000012841

20670831 - 20704434

33604