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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20695643_20696223_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20695643 - 20696223

Intron Length:

581

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGCTCT

5'SS Class:

strong_major

3'SS Sequence:

CTATATCACAAAG|G

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

AATTAAA

U12 Branch Point Sequence:

TTTTCTATATCA

Flanking Amino Acid:

LFTHWNSAMPGKEQGCVAMG

Intron Amino Acid Position:

384

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

90.5

0.95

0.8

81.4

33.4

Major BPS

73.8

0.59

0.9

26.8

Major PPT

56.3

0.14

1.1

56.3

37.8

Minor 5ss

46.5

-0.4

2.8

65.7

45.4

Minor BPS

62.9

0.4

1.9

80.19

35.7

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000048329

20670831 - 20706391

35561

ENSAPLT00000039291

20670831 - 20707144

36314

ENSAPLT00000012841

20670831 - 20704434

33604