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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20698627_20699866_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20698627 - 20699866

Intron Length:

1240

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTATAACTA

5'SS Class:

major

3'SS Sequence:

CCTGCTATTCCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TTTACAT

U12 Branch Point Sequence:

ATATTTTTACAT

Flanking Amino Acid:

LENCVVMKGQDGYWATDVCD

Intron Amino Acid Position:

258

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

73.8

0.56

66.7

38.5

Major BPS

82.7

0.81

0.9

89.3

26.1

Major PPT

75.2

0.57

0.9

65.6

39.8

Minor 5ss

-1

3.2

56.3

47.8

Minor BPS

54.5

0.22

1.7

71.8

39.2

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039291

20670831 - 20707144

36314

ENSAPLT00000012841

20670831 - 20704434

33604

ENSAPLT00000048329

20670831 - 20706391

35561