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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20701021_20701837_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

20701021 - 20701837

Intron Length:

817

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTTAGTCAA

5'SS Class:

major

3'SS Sequence:

TAGAGGAACTGAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

CTTTTAT

U12 Branch Point Sequence:

TGTGCTTTTATT

Flanking Amino Acid:

SSKPDSIPKGKLIKCTDGWW

Intron Amino Acid Position:

302

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

72.6

0.53

1.2

37.3

Major BPS

84.1

0.85

0.9

75.3

39.4

Major PPT

41.4

-0.5

1.7

36.7

43.8

Minor 5ss

31.6

-2.1

2.7

34.4

34.6

Minor BPS

58.9

0.36

1.7

76.14

40.9

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012332

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000039291

20670831 - 20707144

36314