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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20717451_20718093_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20717451 - 20718093

Intron Length:

643

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATG|GTAAGCAAA

5'SS Class:

strong_major

3'SS Sequence:

ATGTCATCTTTAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TCATAAT

U12 Branch Point Sequence:

AATACAATACCA

Flanking Amino Acid:

SYFSVCKISDVVAPTDPAQL

Intron Amino Acid Position:

1216

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.2

0.78

0.9

75.9

35.2

Major BPS

75.2

0.63

1.1

74.5

36.6

Major PPT

0.47

0.9

67.8

38.5

Minor 5ss

38.8

-1.3

2.9

45.4

43.9

Minor BPS

44.3

-0.4

2.1

58.55

40.1

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012779

20709692 - 20747540

37849