Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_20740355_20740983_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20740355 - 20740983

Intron Length:

629

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAGGTGTG

5'SS Class:

strong_major

3'SS Sequence:

ACATTTCCCAAAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGTACAT

U12 Branch Point Sequence:

TTTTTTGTACAT

Flanking Amino Acid:

SPFRYLNWAPGSPSPESGKL

Intron Amino Acid Position:

304

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

86.1

0.85

0.9

76.2

39.9

Major BPS

67.6

0.44

1.2

Major PPT

60.5

0.24

60.2

Minor 5ss

34.9

-1.7

3.5

48.2

47.9

Minor BPS

47.9

-0

2.3

75.95

41.3

Associated Gene:

Gene:

Ensembl Gene ID:

ENSAPLG00000012263

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000012779

20709692 - 20747540

37849