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Intron Name: Anas_platyrhynchos_platyrhynchos_2_20889427_20891054_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

20889427 - 20891054

Intron Length:

1628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTAAGTGTG

5'SS Class:

strong_major

3'SS Sequence:

ATTTTTGTTCTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CACTAAT

U12 Branch Point Sequence:

AATTACACAATT

Flanking Amino Acid:

PEPEPVYIDEDKMDQLLQML

Intron Amino Acid Position:

297

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.8

0.84

0.9

35.3

Major BPS

74.4

0.61

0.9

73.6

28.6

Major PPT

81.1

0.7

0.9

Minor 5ss

-1.4

3.3

49.5

41.1

Minor BPS

48.4

-0

1.9

70.56

39.8

Associated Gene:

Gene:

STAM

Ensembl Gene ID:

ENSAPLG00000010967

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000011448

20883951 - 20903185

19235