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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21037047_21037452_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21037047 - 21037452

Intron Length:

406

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAGCTGC

5'SS Class:

strong_major

3'SS Sequence:

TTTTCTTCCGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTAAT

U12 Branch Point Sequence:

TTATTAATAATA

Flanking Amino Acid:

IPTFASLNLRETNIESQPMV

Intron Amino Acid Position:

419

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

88.3

0.9

73.2

39.3

Major BPS

91.8

1.04

0.7

90.2

19.3

Major PPT

88.4

0.86

0.6

84.8

22.8

Minor 5ss

44.2

-0.6

2.9

59.3

45.5

Minor BPS

53.7

0.11

1.8

70.2

35.6

Associated Gene:

Gene:

VIM

Ensembl Gene ID:

ENSAPLG00000010218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043773

21036392 - 21044553

8162

ENSAPLT00000010706

21036392 - 21044069

7678