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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21037497_21037586_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21037497 - 21037586

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAAAATC

5'SS Class:

strong_major

3'SS Sequence:

TTTTTTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTCAT

U12 Branch Point Sequence:

TCTGACTTCATT

Flanking Amino Acid:

YRKLLEGEESRINMPIPTFA

Intron Amino Acid Position:

404

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

84.1

0.8

0.9

81.4

30.4

Major BPS

78.6

0.71

79.6

32.9

Major PPT

1.06

0.5

96.7

11.4

Minor 5ss

37.4

-1.4

3.2

51.9

44.9

Minor BPS

50.2

0.09

2.1

72.18

45.2

Associated Gene:

Gene:

VIM

Ensembl Gene ID:

ENSAPLG00000010218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010706

21036392 - 21044069

7678

ENSAPLT00000043773

21036392 - 21044553

8162