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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21037808_21038520_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21037808 - 21038520

Intron Length:

713

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AGC|GTAAGTAGA

5'SS Class:

major

3'SS Sequence:

TATTCTCTTTCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTGTTAT

U12 Branch Point Sequence:

AGTGCCTTATCT

Flanking Amino Acid:

TCEVDALKGSNESLERQMRE

Intron Amino Acid Position:

331

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.9

0.47

1.3

68.9

43.8

Major BPS

81.3

0.78

1.1

71.7

44.6

Major PPT

87.8

0.85

0.7

85.4

28.9

Minor 5ss

-1.6

2.7

37.9

Minor BPS

64.6

0.54

1.7

79.23

42.7

Associated Gene:

Gene:

VIM

Ensembl Gene ID:

ENSAPLG00000010218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043773

21036392 - 21044553

8162

ENSAPLT00000010706

21036392 - 21044069

7678