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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21038647_21039091_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21038647 - 21039091

Intron Length:

445

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTAAGTAAA

5'SS Class:

strong_major

3'SS Sequence:

GGGATTTCCACAG|T

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TGCTAAC

U12 Branch Point Sequence:

TTTTGCTAACCA

Flanking Amino Acid:

QEAEEWYKSKFADLSEAANR

Intron Amino Acid Position:

289

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

87.7

0.89

0.9

23.6

Major BPS

69.4

0.48

1.1

69.6

35.5

Major PPT

64.9

0.34

57.2

43.2

Minor 5ss

36.8

-1.5

2.7

42.6

38.4

Minor BPS

51.5

0.04

2.3

74.7

43.3

Associated Gene:

Gene:

VIM

Ensembl Gene ID:

ENSAPLG00000010218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000043773

21036392 - 21044553

8162

ENSAPLT00000010706

21036392 - 21044069

7678