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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21043415_21043524_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21043415 - 21043524

Intron Length:

110

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAA|GTGAGTCCA

5'SS Class:

major

3'SS Sequence:

TCGCCGCTTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CCCTCAC

U12 Branch Point Sequence:

GCCCCCTCACCG

Flanking Amino Acid:

LADDITRLREKLQEEMLQRE

Intron Amino Acid Position:

182

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

79.9

0.7

0.9

70.5

35.4

Major BPS

60.1

0.25

1.1

62.9

34.3

Major PPT

72.4

0.5

0.9

36.3

Minor 5ss

30.8

-2.2

2.8

33.9

34.8

Minor BPS

45.1

-0.5

1.9

45.65

46.4

Associated Gene:

Gene:

VIM

Ensembl Gene ID:

ENSAPLG00000010218

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000010706

21036392 - 21044069

7678