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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21081428_21085837_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21081428 - 21085837

Intron Length:

4410

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TTG|GTATGTGCT

5'SS Class:

strong_major

3'SS Sequence:

TGTTTTGTTTTAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TAATTAC

U12 Branch Point Sequence:

ACTGTATTATCT

Flanking Amino Acid:

ANLHGFPPEFGFPDKVTVKQ

Intron Amino Acid Position:

372

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.6

0.72

0.9

73.2

35.6

Major BPS

0.42

1.1

38.5

Major PPT

82.4

0.73

0.9

81.2

36.5

Minor 5ss

41.6

-0.9

3.1

55.7

43.9

Minor BPS

-0

1.9

66.64

44.2

Associated Gene:

Gene:

TRDMT1

Ensembl Gene ID:

ENSAPLG00000004660

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000004818

21058350 - 21085938

27589