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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21119318_21119517_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21119318 - 21119517

Intron Length:

200

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GAG|GTAAAGAAT

5'SS Class:

strong_major

3'SS Sequence:

TACTGTTCTTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

ATATATTGAATA

Flanking Amino Acid:

TSTCDSDYVEVRDGNNTDSP

Intron Amino Acid Position:

879

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

83.1

0.78

0.9

81.1

32.6

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

80.2

0.68

0.9

77.2

36.8

Minor 5ss

33.3

-1.9

3.3

47.8

47.9

Minor BPS

54.1

0.12

1.6

64.7

35.2

Associated Gene:

Gene:

CUBN

Ensembl Gene ID:

ENSAPLG00000003733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003922

21096379 - 21236951

140573