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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21167046_21173308_F

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21167046 - 21173308

Intron Length:

6263

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAA|GTAACCATA

5'SS Class:

weak_major

3'SS Sequence:

CCTAGCAATGAAG|C

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TTGTGAT

U12 Branch Point Sequence:

CTTTTTGTGATA

Flanking Amino Acid:

HSCNYDNVAVTPLLRKLCGT

Intron Amino Acid Position:

1575

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.4

0.44

1.2

71.7

40.1

Major BPS

81.2

0.78

1.1

71.4

45.1

Major PPT

51.5

0.03

1.1

49.8

37.3

Minor 5ss

50.9

0.03

2.5

66.4

38.9

Minor BPS

48.9

-0

64.35

37.1

Associated Gene:

Gene:

CUBN

Ensembl Gene ID:

ENSAPLG00000003733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003922

21096379 - 21236951

140573