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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21198377_21201516_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21198377 - 21201516

Intron Length:

3140

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TAG|GTTTGTATG

5'SS Class:

major

3'SS Sequence:

TTTCTTTGCTCAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTCGAAA

U12 Branch Point Sequence:

GATTCGAAAAGT

Flanking Amino Acid:

CQYDYIELRIGDADGELIAK

Intron Amino Acid Position:

2638

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

77.1

0.64

1.1

75.6

Major BPS

60.4

0.26

1.4

69.9

35.3

Major PPT

83.8

0.76

0.8

84.1

30.8

Minor 5ss

41.8

-0.9

2.5

51.4

45.2

Minor BPS

40.2

-0.6

2.6

62.7

46.8

Associated Gene:

Gene:

CUBN

Ensembl Gene ID:

ENSAPLG00000003733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003922

21096379 - 21236951

140573