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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21201667_21202533_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21201667 - 21202533

Intron Length:

867

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTAAAGGGC

5'SS Class:

major

3'SS Sequence:

TTTTTTTCTTCAG|C

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TATTGAA

U12 Branch Point Sequence:

GTGTATTGAATT

Flanking Amino Acid:

KGFWAHYTFEACGGIQSGER

Intron Amino Acid Position:

2688

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.5

0.67

66.2

39.3

Major BPS

79.4

0.73

0.9

69.6

37.5

Major PPT

1.06

0.5

96.7

11.4

Minor 5ss

28.9

-2.4

3.6

41.1

45.6

Minor BPS

54.3

0.21

1.6

70.51

40.6

Associated Gene:

Gene:

CUBN

Ensembl Gene ID:

ENSAPLG00000003733

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003922

21096379 - 21236951

140573