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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21269056_21269324_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21269056 - 21269324

Intron Length:

269

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ATA|GTAAGTAAT

5'SS Class:

strong_major

3'SS Sequence:

TGTTCGTTCTTAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

ACTTTAT

U12 Branch Point Sequence:

TTGTTCTGACTA

Flanking Amino Acid:

DIGKLTKLQILSLRDNDLIS

Intron Amino Acid Position:

169

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

80.8

0.73

0.9

82.5

29.6

Major BPS

75.1

0.62

65.6

Major PPT

75.2

0.57

0.9

73.3

37.1

Minor 5ss

39.3

-1.2

2.9

Minor BPS

54.2

0.13

1.7

67.3

39.8

Associated Gene:

Gene:

RSU1

Ensembl Gene ID:

ENSAPLG00000003574

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000003678

21240098 - 21336794

96697