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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21372099_21374960_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21372099 - 21374960

Intron Length:

2862

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAAGGAAA

5'SS Class:

strong_major

3'SS Sequence:

ATATGCTCTGCAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATATAT

U12 Branch Point Sequence:

TTTGTGTTATAT

Flanking Amino Acid:

ASKTVMSHLDRTIFDTEKLL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

91.6

0.98

0.8

28.8

Major BPS

71.4

0.53

67.3

39.3

Major PPT

0.54

0.9

66.8

39.7

Minor 5ss

31.6

-2.1

3.1

46.4

Minor BPS

46.1

-0.2

2.4

72.21

44.9

Associated Gene:

Gene:

PTER

Ensembl Gene ID:

ENSAPLG00000031164

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000031293

21368343 - 21375211

6869