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Intron Name: Anas_platyrhynchos_platyrhynchos_2_213747_217548_R

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

213747 - 217548

Intron Length:

3802

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

ACG|GTAAGCCAC

5'SS Class:

major

3'SS Sequence:

TCTTCTCTTCCAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

CTCTAAT

U12 Branch Point Sequence:

CCATCTCTAATG

Flanking Amino Acid:

QSKRRSNIFTSRKGADPERE

Intron Amino Acid Position:

274

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.6

0.67

63.6

42.9

Major BPS

82.2

0.8

0.9

81.6

Major PPT

88.5

0.87

0.7

80.8

31.2

Minor 5ss

38.6

-1.3

3.1

51.7

Minor BPS

49.6

-0.1

1.8

52.17

43.1

Associated Gene:

Gene:

AGAP3

Ensembl Gene ID:

ENSAPLG00000009810

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020512

161522 - 246527

85006

ENSAPLT00000007060

161522 - 267922

106401