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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21756830_21805735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21756830 - 21805735

Intron Length:

48906

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAG|GTCGGTGCG

5'SS Class:

major

3'SS Sequence:

TTTGTCGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TTTCCAGTGATA

Flanking Amino Acid:

KTLGAPEAAQEVTLKVHVSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

69.2

0.45

1.4

62.9

40.4

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

82.8

0.74

0.9

77.1

37.1

Minor 5ss

-2.6

3.1

32.7

42.2

Minor BPS

47.9

-0.1

2.2

69.02

37.2

Associated Gene:

Gene:

FAM171A1

Ensembl Gene ID:

ENSAPLG00000013617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000020178

21756736 - 21840845

84110

ENSAPLT00000014202

21756700 - 21840845

84146