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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21768598_21805735_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21768598 - 21805735

Intron Length:

37138

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTGAGGGCT

5'SS Class:

strong_major

3'SS Sequence:

TTTGTCGTTGCAG|A

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TGATAAT

U12 Branch Point Sequence:

TTTCCAGTGATA

Flanking Amino Acid:

MEMAHCPEVTLKVHVSD

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

85.9

0.85

0.9

75.6

33.8

Major BPS

72.6

0.56

1.2

72.3

40.4

Major PPT

82.8

0.74

0.9

77.1

37.1

Minor 5ss

26.4

-2.7

3.5

38.5

46.7

Minor BPS

47.9

-0.1

2.2

69.02

37.2

Associated Gene:

Gene:

FAM171A1

Ensembl Gene ID:

ENSAPLG00000013617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045104

21767382 - 21840845

73464

ENSAPLT00000026332

21768024 - 21840845

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