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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21805964_21811591_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21805964 - 21811591

Intron Length:

5628

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CTG|GTAAGAGAC

5'SS Class:

strong_major

3'SS Sequence:

TTATCTTCTACAG|T

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

ACTTAAA

U12 Branch Point Sequence:

TCCCACTTAAAC

Flanking Amino Acid:

SAPWKPVRLPVFSSLSLGLL

Intron Amino Acid Position:

108

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

0.78

0.9

71.3

32.5

Major BPS

0.47

69.9

32.6

Major PPT

85.8

0.81

0.8

80.6

31.2

Minor 5ss

30.9

-2.2

3.4

38.5

41.1

Minor BPS

54.9

0.13

1.7

62.19

42.7

Associated Gene:

Gene:

FAM171A1

Ensembl Gene ID:

ENSAPLG00000013617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000045104

21767382 - 21840845

73464

ENSAPLT00000026332

21768024 - 21840845

72822

ENSAPLT00000014202

21756700 - 21840845

84146