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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21816835_21821786_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21816835 - 21821786

Intron Length:

4952

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CAG|GTAACCCAC

5'SS Class:

major

3'SS Sequence:

ATTCTCTTGGTAG|G

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTCAT

U12 Branch Point Sequence:

TATTCATTCATT

Flanking Amino Acid:

YLQGLDGNGTGNSTRYDLTP

Intron Amino Acid Position:

192

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

74.3

0.57

1.2

63.2

43.4

Major BPS

92.2

1.05

0.7

91.9

19.6

Major PPT

72.7

0.51

0.9

70.1

35.8

Minor 5ss

43.7

-0.7

2.9

59.1

45.6

Minor BPS

60.5

0.41

82.44

38.8

Associated Gene:

Gene:

FAM171A1

Ensembl Gene ID:

ENSAPLG00000013617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014202

21756700 - 21840845

84146

ENSAPLT00000045104

21767382 - 21840845

73464

ENSAPLT00000026332

21768024 - 21840845

72822

ENSAPLT00000020178

21756736 - 21840845

84110