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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21821964_21835802_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21821964 - 21835802

Intron Length:

13839

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

TCG|GTAGGTAAC

5'SS Class:

major

3'SS Sequence:

TTTGTATTTACAG|G

3'SS Class:

strong_PPT

U2 Branch Point Sequence:

TTTGTAT

U12 Branch Point Sequence:

CTTTCTACAACC

Flanking Amino Acid:

VPAWRFDQKFGTWLKSSLGL

Intron Amino Acid Position:

251

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

78.2

0.66

1.1

72.7

38.8

Major BPS

71.5

0.53

1.4

71.7

44.6

Major PPT

86.7

0.82

0.8

80.7

35.9

Minor 5ss

35.1

-1.7

45.5

42.9

Minor BPS

56.4

0.18

1.9

71.44

39.9

Associated Gene:

Gene:

FAM171A1

Ensembl Gene ID:

ENSAPLG00000013617

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000014202

21756700 - 21840845

84146

ENSAPLT00000045104

21767382 - 21840845

73464

ENSAPLT00000026332

21768024 - 21840845

72822

ENSAPLT00000020178

21756736 - 21840845

84110