Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_21854250_21862046_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21854250 - 21862046

Intron Length:

7797

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

GGG|GTAGGGGCG

5'SS Class:

major

3'SS Sequence:

GAATTTCTGGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TATTGAT

U12 Branch Point Sequence:

ATTCTCTGAATT

Flanking Amino Acid:

DNEEEAEHAKGSPGGDLGAK

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

68.2

0.43

1.2

55.6

40.8

Major BPS

88.6

0.96

0.8

77.7

37.1

Major PPT

66.9

0.38

1.1

62.3

43.8

Minor 5ss

27.7

-2.6

3.6

29.5

43.4

Minor BPS

66.3

0.59

1.4

80.65

34.6

Associated Gene:

Gene:

NMT2

Ensembl Gene ID:

ENSAPLG00000013818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019680

21853318 - 21881381

28064

ENSAPLT00000014452

21853353 - 21885237

31885