Gene Search

About Basic Search Advanced Search Downloads

Gene Search

Intron Name: Anas_platyrhynchos_platyrhynchos_2_21862183_21867498_F

Intron Information:

Intron Rank:

Intron Class:

major

Intron Phase:

Intron Coordinates:

21862183 - 21867498

Intron Length:

5316

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

AAA|GTGAGAGCC

5'SS Class:

major

3'SS Sequence:

TGTCTCTGTGCAG|A

3'SS Class:

major_PPT

U2 Branch Point Sequence:

TAAACAT

U12 Branch Point Sequence:

TATCCAATAAGC

Flanking Amino Acid:

QEIKIQQPSKNPAIPMQKLQ

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

75.6

0.6

65.8

31.9

Major BPS

63.2

0.33

1.1

69.6

35.7

Major PPT

77.9

0.63

0.9

37.3

Minor 5ss

-2.5

3.2

34.4

Minor BPS

-0.2

2.1

63.81

40.8

Associated Gene:

Gene:

NMT2

Ensembl Gene ID:

ENSAPLG00000013818

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000019680

21853318 - 21881381

28064

ENSAPLT00000014452

21853353 - 21885237

31885