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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21886169_21886208_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21886169 - 21886208

Intron Length:

Sequence Information:

Terminal Dinucleotides:

GC-AG

5'SS Sequence:

GAG|GCTCCAAGG

5'SS Class:

weak_major

3'SS Sequence:

ACAAAAAAAACAG|A

3'SS Class:

degenerate_major

U2 Branch Point Sequence:

TACAAAA

U12 Branch Point Sequence:

CGTTCCAGTACA

Flanking Amino Acid:

IKQIGLKKVEMERKCDASNN

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

58.3

0.2

1.4

48.4

47.2

Major BPS

60.3

0.26

65.5

Major PPT

47.2

-0.1

1.1

34.4

37.9

Minor 5ss

23.4

-3.1

3.7

32.6

41.6

Minor BPS

47.1

-0.2

2.1

62.26

43.1

Associated Gene:

Gene:

RPP38

Ensembl Gene ID:

ENSAPLG00000002054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002051

21885539 - 21888118

2580