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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21886346_21888078_R

Intron Information:

Intron Rank:

Intron Class:

major-like

Intron Phase:

Intron Coordinates:

21886346 - 21888078

Intron Length:

1733

Sequence Information:

Terminal Dinucleotides:

GT-AG

5'SS Sequence:

CGG|GTTGGGAGC

5'SS Class:

weak_major

3'SS Sequence:

TCACTTCGTAAAG|C

3'SS Class:

major_PPT

U2 Branch Point Sequence:

CTGTAAT

U12 Branch Point Sequence:

ATGTCTGTAATT

Flanking Amino Acid:

PPPSPGRDESAKKTTVKNCL

Intron Amino Acid Position:

Site Scores:

Score

LOD

LOD StDev

Match

Match StDev

Major 5ss

57.6

0.18

1.3

51.4

42.5

Major BPS

72.1

0.55

1.2

73.3

39.1

Major PPT

62.3

0.28

1.1

37.3

Minor 5ss

27.1

-2.6

3.1

26.7

36.6

Minor BPS

59.6

0.38

77.6

39.8

Associated Gene:

Gene:

RPP38

Ensembl Gene ID:

ENSAPLG00000002054

Chromosome:

Associated Transcripts:

Ensembl Transcript ID

Transcript Coordinates

Transcript Length

ENSAPLT00000002051

21885539 - 21888118

2580