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Intron Name: Anas_platyrhynchos_platyrhynchos_2_21898523_21898609_F


Intron Information:

Intron Rank:
3

Intron Class:
major

Intron Phase:
1

Intron Coordinates:
21898523 - 21898609

Intron Length:
87

Sequence Information:

Terminal Dinucleotides:
GT-AG

5'SS Sequence:
AAG|GTGTTAAAG

5'SS Class:
major

3'SS Sequence:
CTTTTCTTTGCAG|G

3'SS Class:
strong_PPT

U2 Branch Point Sequence:
CAATAAT

U12 Branch Point Sequence:
TTACTCCTACTT

Flanking Amino Acid:
AKWEAWNLKKGISKEDAMNA

Intron Amino Acid Position:
66

Site Scores:

Score
LOD
LOD StDev
Match
Match StDev

Major 5ss
68.8
0.44
1
62.2
37.6

Major BPS
67.7
0.44
1.1
67.9
34.4

Major PPT
92.5
0.96
0.6
88.1
21.6

Minor 5ss
33.5
-1.9
2.8
39.5
46

Minor BPS
48.5
-0
1.9
70.59
40.4

Associated Gene:

Gene:
ACBD7

Ensembl Gene ID:

Chromosome:
2

Associated Transcripts:

Ensembl Transcript ID
Transcript Coordinates
Transcript Length

21893615 - 21898683
5069